CDS
| Accession Number | TCMCG051C29025 |
| gbkey | CDS |
| Protein Id | XP_002312889.2 |
| Location | complement(join(11841073..11841214,11841304..11841383,11841713..11841784,11841864..11841944,11842870..11842995,11843116..11843202,11843311..11843475,11843617..11843697,11843949..11844188,11844297..11844479,11844615..11844735,11844830..11844934,11845025..11845131,11845263..11845328,11845426..11845531,11846088..11846176,11846305..11846386,11846684..11846781,11846933..11847034,11847803..11847895,11847976..11848047,11848295..11848502,11848593..11848690,11848767..11848829,11849037..11849162,11849548..11849679,11851399..11851530)) |
| Gene | LOC7474927 |
| GeneID | 7474927 |
| Organism | Populus trichocarpa |
Protein
| Length | 1018aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA17973 |
| db_source | XM_002312853.3 |
| Definition | AP-2 complex subunit alpha-1 [Populus trichocarpa] |
EGGNOG-MAPPER Annotation
| COG_category | U |
| Description | Subunit of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko04131 [VIEW IN KEGG] ko04147 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11824
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko04144
[VIEW IN KEGG] ko04721 [VIEW IN KEGG] ko04961 [VIEW IN KEGG] ko05016 [VIEW IN KEGG] map04144 [VIEW IN KEGG] map04721 [VIEW IN KEGG] map04961 [VIEW IN KEGG] map05016 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005886 [VIEW IN EMBL-EBI] GO:0016020 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0071944 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCGTTATCAGGCATGAGAGGACTCTCTGTCTTTATAAGCGATATTCGAAATTGTCCAAACAAAGAGCAAGAAAGACTTCGCGTTGATAAAGAGCTTGGCAATATCCGTACTCGCTTCAAAAACGAAAAGGGCTTGACTCCTTATGAAAAGAAGAAATATGTTTGGAAAATGCTTTACATTTACATGCTAGGCTACGATGTAGATTTTGGTCACATGGAAGCTGTTTCCTTAATATCCGCACCAAAGTACCCTGAAAAGCAGGTTGGATACATAGTGACATCATCTTTGCTAAATGAGAACCATGATTTTCTCAGATTAGCAATAAATACAGTGCGCAATGATATTATTGGTCGGAATGAAACTTTTCAGTGCCTGGCTTTGACTATGGTTGGAAATATTGGTGGGAGAGAATTTGCTGAATCATTGGCACCAGACGTTCAAAAGTTACTAATTTCTAGTAGCTGCAGACCACTTGTGAGAAAGAAGGCTGCATTATGTTTGCTGCGCTTGTACAGAAAAAATCCAGATGTTGTCAATGTAGATGGCTGGTCGGATCGGATGGCACAGCTGTTAGATGAACGTGATCTTGGTGTTTTGACGTCTTGTATGAGTCTTCTTGTTGCTTTAGTGTCAAATAACCATGAAGCATATTGGAGTTGTGTACCGAAATGTGTTAAGACACTGGAGCGACTTGCTAGGAACCAGGATATTCCACAAGAATACACTTATTATGGTATTCCATCTCCTTGGCTTCAGGTTAAGACAATGAGGGCTCTTCAGTACTATCCGACTATTGAAGATCCTAATACTAGAAGATCCTTGTTTGAGGTCTTACAGCGGATACTAATGGGAACTGATGTTGTAAAAAATGTAAATAAGAACAACGCATCGCATGCTGTTCTCTTTGAAGCCCTTGCTCTTGTAATGCACCTTGATGCTGAAAAAGAGATGATGTCTCAGTGTGTTGCCCTCCTTGGCAAATTTATTGCCGTTCGTGAACCAAATATCCGTTATCTTGGCTTGGAGAATATGACTCGGATGTTGATGGTTACAGACGTGCATGATATCATTAAAAGACATCAGGCTCAGATCATCACCTCATTGAAAGATCCTGACATCAGTATCCGTCGGCGTGCTCTTGATTTGCTTTATGGTATGTGTGATGTTTCAAATGCAAAGGACATAGTGGAAGAACTGTTGCAGTATCTTAGCACAGCAGATTTTGCAATGCGTGAGGAGTTGTCTCTTAAAGCTGCTATTCTTGCAGAAAAGTTTTTTCCTGATTTGTCTTGGTACGTGGATGTGATCCTTCAATTGATTGACAAGGCGGGAGATTTTGTCAGCGATGATATATGGTTTCGTGTTGTGCAGTTTGTTACAAACAATGAAGACCTACAGCCTTATGCAGCAGCAAAGGCCAGAGAGTATCTTGACAAGCCTGCCATACATGAGACAATGGTCAAGGTCAGTGCATATCTCCTTGGAGAGTACAGCCACCTTTTGGCCAGACGGCCTGGGTGTAGTCCGAAGGAAATTTTTAGTGTCATACATGAGAAGCTTCCTACTGTATCAACTACTACCATTCCAATTCTTCTTTCCACGTATGCTAAGATCTTAATGCACACTCAACCCCCTGACCCAGAACTACAGAAACATGTCTGGGCAATATTTAGCAAATACGAGAGTTGCATTGATGTTGAGATACAACAGCGAGCAATTGAGTATTTTGCATTAAGTAGGAAAGGTGCAGCTGTAATGGACATATTGGCTGAAATGCCTAAATTCCCTGAGCGTCAGTCTGCATTGATTAAAAAAGCTGAGGTTGCTGAAGTAGATACTGCAGAGCAAAGTGCTATTAAGTTGCGGGCGCAGCAGCATATGTCTAATGCTTTGGTTGTAACAGACCAACAACCTTCGAATGGGACCCCTCAATCTGTTGGCCAGCTTAGTCTAGTAAAGATTCCCAGCATGAGTGGCGATGAGCATACTTCAGCAGTTCAAGAATTGTCCCAGGCAAATGGGACTTTGGCTACAGTAGATCCTCAATCTCCTTCAGCAGATCTCCTAGGTGATCTCTTGGGTCCACTGGCAATTGAGGGCCCTCCTGGAGCTGCTGTCCAATTTGAGCCAAATGCAGTTTCTGGACTGGAAGGGGTTCCAATTCCAGCGGATGATGCAGCAGCTATTGTACCTGTAGGAAAGGAAACTAATTCTGTCCAGCCAATTGGAAATATCAATGAAAGGTTTTATGCTTTATGCTTGAAGGATAGTGGTGTTTTATATGAGGATCCAAACATTCAGATTGGTATTAAAGCGGAGTGGCGAGCTCAGCATGGACGTCTTGTCCTTTTCTTGGGAAACAAAAACACTTCTCCACTTCTTTCTGTTCGGGCTCAGATATTACCCCCTGCCCATTTAAAAATCGAACTCTCATTGGTACCTGAAACAATTCCTCCACGGGCACAGGTGCAATGCCCGCTTGAAATAATGAATCTCCATCCAAGCAGGGATGTTGCTGTTCTTGACTTCTCGTACAAGTTTGGTACAAACATGGCCAATGTCAAGCTTCGCCTTCCAGCTGTTCTGAACAAATTTCTTCAGCCTATTACAGTGTCTGCTGATGAGTTTTTCCCTCAGTGGAGATCACTTTCAGGACCACCACTGAAGCTTCAAGAAGTTGTTAGAGGTGTAAGACCATTGTCTCTCATTGACATGGCAAACATATTTACCAGCTCTCGGCTGACAGTTTGTCCAGGGCTTGACCCAAACCCCAATAACCTGATTGCAAGTACTACCTTCTACTCAGAGAGCATCCGGCCCATGCTTTGCTTGATTAGAATTGAAACAGATCCCGCAGACCGAACACAGTTGCGGATGACAGTTGCCTCAGGGGACCCAACACTAACATTTGAGCTGAAGGAGTTTATCAAAGAACAATTAGTTAGTATTCCAACAGCACCGCCTCCACCAGCACCACCCGCTGCTCCAGTAGCTCAACCAACCAATGCTGCAGCTTTGACGGATCCTGGAGCTCTGCTGGCTGGTTTGCTGTAA |
| Protein: MALSGMRGLSVFISDIRNCPNKEQERLRVDKELGNIRTRFKNEKGLTPYEKKKYVWKMLYIYMLGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSSLLNENHDFLRLAINTVRNDIIGRNETFQCLALTMVGNIGGREFAESLAPDVQKLLISSSCRPLVRKKAALCLLRLYRKNPDVVNVDGWSDRMAQLLDERDLGVLTSCMSLLVALVSNNHEAYWSCVPKCVKTLERLARNQDIPQEYTYYGIPSPWLQVKTMRALQYYPTIEDPNTRRSLFEVLQRILMGTDVVKNVNKNNASHAVLFEALALVMHLDAEKEMMSQCVALLGKFIAVREPNIRYLGLENMTRMLMVTDVHDIIKRHQAQIITSLKDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTADFAMREELSLKAAILAEKFFPDLSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQPYAAAKAREYLDKPAIHETMVKVSAYLLGEYSHLLARRPGCSPKEIFSVIHEKLPTVSTTTIPILLSTYAKILMHTQPPDPELQKHVWAIFSKYESCIDVEIQQRAIEYFALSRKGAAVMDILAEMPKFPERQSALIKKAEVAEVDTAEQSAIKLRAQQHMSNALVVTDQQPSNGTPQSVGQLSLVKIPSMSGDEHTSAVQELSQANGTLATVDPQSPSADLLGDLLGPLAIEGPPGAAVQFEPNAVSGLEGVPIPADDAAAIVPVGKETNSVQPIGNINERFYALCLKDSGVLYEDPNIQIGIKAEWRAQHGRLVLFLGNKNTSPLLSVRAQILPPAHLKIELSLVPETIPPRAQVQCPLEIMNLHPSRDVAVLDFSYKFGTNMANVKLRLPAVLNKFLQPITVSADEFFPQWRSLSGPPLKLQEVVRGVRPLSLIDMANIFTSSRLTVCPGLDPNPNNLIASTTFYSESIRPMLCLIRIETDPADRTQLRMTVASGDPTLTFELKEFIKEQLVSIPTAPPPPAPPAAPVAQPTNAAALTDPGALLAGLL |